Information for 15-AGCAAASGDCATT (Motif 21)

C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T
Reverse Opposite:
T G C A T G C A C G A T A T C G G T C A A G T C T A G C A G C T C A G T A G C T A C T G A G T C G A C T
p-value:1e-10
log p-value:-2.410e+01
Information Content per bp:1.690
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif144.2
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets51.7 +/- 22.3bp
Average Position of motif in Background49.2 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGCAAASGDCATT
--CAAAGGTCAG-
 C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAASGDCATT
ANGNAAAGGTCA--
 A C G T C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGCAAASGDCATT--
TCTCAAAGGTCACCTG
 A C G T C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGCAAASGDCATT--
TCTCAAAGGTCACGAG
 A C G T C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGCAAASGDCATT
TAGGGCAAAGGTCA--
 A C G T A C G T A C G T C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAASGDCATT
TGGGGCAAAGGTCA--
 A C G T A C G T A C G T C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGCAAASGDCATT
AGAGTCCAAAGTCCA--
 A C G T A C G T A C G T A C G T C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGCAAASGDCATT
GTAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C G T C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AGCAAASGDCATT
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGCAAASGDCATT---
TATTCAAGGTCATGCGA
 A C G T C T G A T C A G T G A C T C G A G C T A C T G A A T C G T C A G C A G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A