Information for 7-GGAATTSMAGGAA (Motif 10)

A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C A C G T A C T G A T C G C G T A C G T A A C G T C G A T A G T C A G T C
p-value:1e-13
log p-value:-3.002e+01
Information Content per bp:1.922
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.1 +/- 14.9bp
Average Position of motif in Background43.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGAATTSMAGGAA--
-NATTTCCNGGAAAT
 A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGAATTSMAGGAA-
NGCTTTCTAGGAAN
 A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGAATTSMAGGAA-
---TTTCCAGGAAA
 A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGAATTSMAGGAA-
NNNCTTTCCAGGAAA
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GGAATTSMAGGAA-
----TTCCNGGAAG
 A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGAATTSMAGGAA----
---TTTCCAGGAAATGG
 A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGAATTSMAGGAA--
-NNCTTCCNGGAAGN
 A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGAATTSMAGGAA-
--NTTTCCNGGAAA
 A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T
A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGAATTSMAGGAA--
-CAAATTCCGGAACC
 A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T A C G T
A C G T G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGAATTSMAGGAA--
----TTCTTGGAAAN
 A C T G A C T G C G T A C G T A A C G T A C G T A T G C G T A C C G T A A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T