Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.054e+01 | 0.0097 | 23.0 | 2.56% | 460.4 | 0.95% | motif file (matrix) |
svg |
2 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-4 | -9.848e+00 | 0.0097 | 63.0 | 7.02% | 2014.3 | 4.16% | motif file (matrix) |
svg |
3 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-3 | -9.142e+00 | 0.0130 | 68.0 | 7.57% | 2279.6 | 4.70% | motif file (matrix) |
svg |
4 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.980e+00 | 0.0130 | 12.0 | 1.34% | 173.7 | 0.36% | motif file (matrix) |
svg |
5 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-3 | -8.901e+00 | 0.0130 | 20.0 | 2.23% | 414.4 | 0.85% | motif file (matrix) |
svg |
6 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.653e+00 | 0.0130 | 49.0 | 5.46% | 1518.8 | 3.13% | motif file (matrix) |
svg |
7 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-3 | -8.546e+00 | 0.0130 | 21.0 | 2.34% | 459.7 | 0.95% | motif file (matrix) |
svg |
8 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -7.659e+00 | 0.0215 | 68.0 | 7.57% | 2406.6 | 4.96% | motif file (matrix) |
svg |
9 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-3 | -7.402e+00 | 0.0247 | 131.0 | 14.59% | 5343.9 | 11.02% | motif file (matrix) |
svg |
10 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.325e+00 | 0.0247 | 38.0 | 4.23% | 1157.9 | 2.39% | motif file (matrix) |
svg |
11 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -6.767e+00 | 0.0381 | 14.0 | 1.56% | 286.1 | 0.59% | motif file (matrix) |
svg |
12 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -6.698e+00 | 0.0381 | 66.0 | 7.35% | 2409.6 | 4.97% | motif file (matrix) |
svg |
13 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -6.630e+00 | 0.0381 | 4.0 | 0.45% | 25.3 | 0.05% | motif file (matrix) |
svg |
14 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -6.570e+00 | 0.0381 | 29.0 | 3.23% | 843.2 | 1.74% | motif file (matrix) |
svg |
15 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.397e+00 | 0.0404 | 101.0 | 11.25% | 4056.4 | 8.37% | motif file (matrix) |
svg |
16 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -6.096e+00 | 0.0513 | 37.0 | 4.12% | 1200.7 | 2.48% | motif file (matrix) |
svg |
17 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.876e+00 | 0.0567 | 18.0 | 2.00% | 458.3 | 0.95% | motif file (matrix) |
svg |
18 |
| Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.876e+00 | 0.0567 | 18.0 | 2.00% | 458.7 | 0.95% | motif file (matrix) |
svg |
19 |
| Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer | 1e-2 | -5.452e+00 | 0.0821 | 29.0 | 3.23% | 913.9 | 1.89% | motif file (matrix) |
svg |
20 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.972e+00 | 0.1261 | 13.0 | 1.45% | 315.7 | 0.65% | motif file (matrix) |
svg |