Information for 2-CCGMMRCMGCYTTYTR (Motif 2)

A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G
Reverse Opposite:
A G T C C G T A C T G A C G T A C G T A C T G A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A T G C A C T G A C T G
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.828
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.4 +/- 18.7bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGMMRCMGCYTTYTR
TCCGCCCCCGCATT---
 A C G T A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCGMMRCMGCYTTYTR
CCCCCGCCCCCGCC-----
 A C G T A C G T A C G T A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCGMMRCMGCYTTYTR-
---NNGCACCTTTCTCC
 A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G A C G T
A C G T A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CCGMMRCMGCYTTYTR-
-----GCCGCCATCTTG
 A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCGMMRCMGCYTTYTR
-CGCAGCTGCG-----
 A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

MSC/MA0665.1/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CCGMMRCMGCYTTYTR
----AACAGCTGTT--
 A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G
A C G T A C G T A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.49
Offset:9
Orientation:forward strand
Alignment:CCGMMRCMGCYTTYTR
---------CTTTGT-
 A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCGMMRCMGCYTTYTR
--NNAGCAGCTGCT--
 A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G
A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCGMMRCMGCYTTYTR
--GCAACAGCTGTTGT
 A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G
A C G T A C G T T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CCGMMRCMGCYTTYTR
------CAGCTGTT--
 A G T C A G T C A T C G G T A C G T A C C T A G A G T C T G A C C T A G A G T C A G C T A C G T A C G T A G C T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T