Information for 1-CCAHAVCACATTTTAC (Motif 1)

A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C
Reverse Opposite:
A C T G A G C T C T G A C G T A C G T A C G T A C G A T A C T G A G C T T C A G A C T G A G C T C A T G A C G T A C T G A C T G
p-value:1e-15
log p-value:-3.596e+01
Information Content per bp:1.734
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif9.21%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets31.7 +/- 24.4bp
Average Position of motif in Background46.4 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC12/MA0906.1/Jaspar

Match Rank:1
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CCAHAVCACATTTTAC----
---------NTTTTACGACC
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXD11/MA0908.1/Jaspar

Match Rank:2
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CCAHAVCACATTTTAC---
---------NTTTTACGAC
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCAHAVCACATTTTAC-------
-------ANATTTTACGAGNNNN
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCAHAVCACATTTTAC
----ACTACAATTCCC
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C
A C G T A C G T A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CCAHAVCACATTTTAC----
---------NTTTTACGACT
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CCAHAVCACATTTTAC----
---------NTTTTACGAGN
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CCAHAVCACATTTTAC----
---------NTTTTACGACC
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCAHAVCACATTTTAC-------
------NNNATTTTACGACNNTN
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CCAHAVCACATTTTAC
--------CTGTTTAC
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:CCAHAVCACATTTTAC
---------TGTTTAC
 A G T C T G A C G T C A G A T C C T G A T A G C A G T C C T G A A G T C C G T A C G A T A C G T A C G T A G C T C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C