Information for 2-TGAGGGSCTCCCC (Motif 6)

A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
Reverse Opposite:
C T A G T A C G A C T G A T C G C G T A A C T G A T C G A T G C A G T C A G T C A C G T A T G C G T C A
p-value:1e-8
log p-value:-1.859e+01
Information Content per bp:1.797
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.8 +/- 10.5bp
Average Position of motif in Background70.6 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGAGGGSCTCCCC
NRRGGGTCTT---
 A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGGSCTCCCC
CTTGAGTGGCT----
 A C G T A C G T A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGGSCTCCCC
TTGAGTGSTT----
 A C G T A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGAGGGSCTCCCC
---AGGCCTAG--
 A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGGGSCTCCCC
NNNATTGGGGGTNTCCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGAGGGSCTCCCC
-GGGGGAATCCCC
 A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGAGGGSCTCCCC
-GTGGGCCCCA--
 A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGAGGGSCTCCCC
-CNAGGCCT----
 A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGAGGGSCTCCCC---
NNNGGGGCGCCCCCNN
 A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGGSCTCCCC
NANAAGGGCGTGGTC
 A C G T A C G T A C G T A T C G C G T A A C T G A C T G A T C G A T G C A G T C A C G T A T G C T G A C A G T C A G T C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C