Information for 6-AAAAGCGTTTATA (Motif 11)

C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C T G A G T C A C G T C G A T A C G T A C G T
p-value:1e-7
log p-value:-1.664e+01
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 10.7bp
Average Position of motif in Background68.0 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AAAAGCGTTTATA
---ANCGTTTANN
 C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAAAGCGTTTATA--
AAAACATCGTTTTTAAG
 A C G T A C G T C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGCGTTTATA-
NNNNNNCTTTTATAN
 A C G T C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGCGTTTATA-
NNNNNNCTTTTATAN
 A C G T C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAAGCGTTTATA
--TATTGTTTATT
 C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A
A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAAAGCGTTTATA---
----CCTTTTATAGNC
 C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAAAGCGTTTATA
---NNCAATTANN
 C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAAAGCGTTTATA---
----NTGTTTAYATWW
 C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAAAGCGTTTATA---
----DGWTTTATGRCN
 C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Hmx2/MA0897.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAAGCGTTTATA----
ACAAGCAATTAAAGAAT
 C G T A C G T A C G T A C G T A A C T G A G T C C T A G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T