p-value: | 1e-5 |
log p-value: | -1.253e+01 |
Information Content per bp: | 1.723 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 4.41% |
Number of Background Sequences with motif | 264.5 |
Percentage of Background Sequences with motif | 0.58% |
Average Position of motif in Targets | 41.9 +/- 16.4bp |
Average Position of motif in Background | 49.0 +/- 26.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AKGCAGASAGGAT --CCAGACAG--- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AKGCAGASAGGAT --CCAGACRSVB- |
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POL008.1_DCE_S_I/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AKGCAGASAGGAT -NGAAGC------ |
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EWSR1-FLI1/MA0149.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AKGCAGASAGGAT-- GGAAGGAAGGAAGGAAGG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AKGCAGASAGGAT- CAAATCCAGACATCACA |
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Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AKGCAGASAGGAT GGTGYTGACAGS-- |
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Foxo1/MA0480.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AKGCAGASAGGAT -TGTAAACAGGA- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AKGCAGASAGGAT --BCAGACWA--- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AKGCAGASAGGAT---- --SCAGYCADGCATGAC |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AKGCAGASAGGAT AGGTGNCAGACAG--- |
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