Information for 6-GATGTTAATGMGG (Motif 17)

C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C C G T A C A G T G A C T G T C A C G T A A G T C C G T A G A C T A G T C
p-value:1e-6
log p-value:-1.383e+01
Information Content per bp:1.732
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif39.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets38.5 +/- 27.1bp
Average Position of motif in Background43.2 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0151.1_Pou6f1_1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATGTTAATGMGG----
GACGATAATGAGCTTGC
 C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GATGTTAATGMGG----
AAACATAATGAGGTTGC
 C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GATGTTAATGMGG-
----NTAATGAGCT
 C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GATGTTAATGMGG
---GKTAATGR--
 C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G
A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GATGTTAATGMGG---
------TATGCGGGTA
 C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GATGTTAATGMGG------
---NNNNATGCGGGTNNNN
 C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATGTTAATGMGG
-CTGTTGCTAGGS
 C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GATGTTAATGMGG
AGGTGTTAAT----
 A C G T C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GATGTTAATGMGG--
AGTTATTAATGAGGTC
 A C G T C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GATGTTAATGMGG
WATGCAAATGAG-
 C T A G C T G A G A C T A C T G C G A T A C G T C G T A G C T A A C G T C T A G T G A C A C T G A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T