Information for 10-GACTMTGASYTGMSKA (Motif 15)

A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
Reverse Opposite:
A C G T G T C A A T C G A C G T G T A C C G T A C T A G A T C G A C G T A G T C C G T A A C T G C T G A A C T G A C G T A G T C
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.846
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 27.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACTMTGASYTGMSKA
TGACCTTGACCT-----
 A C G T A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GACTMTGASYTGMSKA
ATTGGACTTTGACCCC----
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACTMTGASYTGMSKA
TGACCTTGACCT-----
 A C G T A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GACTMTGASYTGMSKA
TGGACTTTGNNCTNTG--
 A C G T A C G T A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GACTMTGASYTGMSKA
TGGACTTTGNNCTCN---
 A C G T A C G T A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GACTMTGASYTGMSKA
-----TGACCTYA---
 A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GACTMTGASYTGMSKA
-----TGACCT-----
 A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GACTMTGASYTGMSKA
GCTGACCTTGAACTN----
 A C G T A C G T A C G T A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GACTMTGASYTGMSKA
NATGACCTTGA--------
 A C G T A C G T A C G T A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GACTMTGASYTGMSKA
TNCCTTTGATGT-----
 A C G T A C T G C G T A A G T C A G C T G T A C A C G T A C T G C G T A A T G C A G T C A C G T A C T G G T C A A T G C A C G T C G T A
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T