Information for 15-AAAGTGTTACATTTCC (Motif 29)

C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C
Reverse Opposite:
A C T G A C T G C G T A T C G A C G T A C G A T A C T G A C G T C G T A C G T A G T A C C G T A A G T C A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 13.3bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0087.1_Irx6/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAAGTGTTACATTTCC---
--ANTTNTACATGTANTTN
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C A C G T A C G T A C G T
A C G T A C G T G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAAGTGTTACATTTCC---
--ANTATTACATGTANNNN
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C A C G T A C G T A C G T
A C G T A C G T G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAAGTGTTACATTTCC---
--NNTTTTACATGTANNNT
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAAGTGTTACATTTCC
-AGGTGTGAAM-----
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAAGTGTTACATTTCC
--NTTGATACATT---
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C
A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAAGTGTTACATTTCC---
--ANTNTTACATGTATNTA
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C A C G T A C G T A C G T
A C G T A C G T C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAAGTGTTACATTTCC---
--ANTNNTACATGTANNTN
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C A C G T A C G T A C G T
A C G T A C G T G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAAGTGTTACATTTCC---
--NNTATTACATGTANNNT
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C A C G T A C G T A C G T
A C G T A C G T G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGTGTTACATTTCC
AAGGTGTGAAA-----
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGTGTTACATTTCC
AAGGTGTKAA------
 C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T G T A C G T A C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T