Information for 11-ATGAAAAACCAAAAGA (Motif 9)

C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
Reverse Opposite:
G C A T G T A C G A C T A C G T A G C T A C G T A C T G A C T G A G C T C G A T G A C T A G C T A C G T T A G C C G T A G C A T
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 31.1bp
Average Position of motif in Background54.7 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ATGAAAAACCAAAAGA
-----AAACCACANN-
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ATGAAAAACCAAAAGA
-----AAACCACAGAN
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATGAAAAACCAAAAGA
----NAAACCACAG--
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGAAAAACCAAAAGA
----NWAACCACADNN
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATGAAAAACCAAAAGA
-----AAACCACAGC-
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ATGAAAAACCAAAAGA
-----AAAACAAAGG-
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ATGAAAAACCAAAAGA
---AAAGATCAAAGG-
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ATGAAAAACCAAAAGA
---AGAAACGAAAGT-
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATGAAAAACCAAAAGA
--AAAAAATCAATAAT
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATGAAAAACCAAAAGA
---AAAAGTCAA----
 C G T A C G A T A T C G G T C A C T G A C T G A C G T A C T G A A G T C A G T C C G T A C T G A G T C A C T G A A C T G C G T A
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T