Information for 19-MGTCAKTGGTTTT (Motif 38)

G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A T C G A G T A C G T A C G T C A T G C A A C G T C T A G C T G A A T G C C A G T
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.692
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif149.4
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets52.9 +/- 26.0bp
Average Position of motif in Background51.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT3/MA0757.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:MGTCAKTGGTTTT--
-NTTATTGATTTTTT
 G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--MGTCAKTGGTTTT-
NNNTTAATTGGTTTTT
 A C G T A C G T G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

ONECUT2/MA0756.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:MGTCAKTGGTTTT--
-ATTATCGATTTTTT
 G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PH0005.1_Barhl1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--MGTCAKTGGTTTT-
GNNTTAATTGGTTGTT
 A C G T A C G T G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

ONECUT1/MA0679.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:MGTCAKTGGTTTT--
-ANTATCGATTTTTN
 G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T A C G T A C G T
A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--MGTCAKTGGTTTT-
NNNTTAATTGGTTTTN
 A C G T A C G T G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:MGTCAKTGGTTTT
--CCATTGTTTT-
 G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MGTCAKTGGTTTT-
--TGATTGGCTANN
 G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:MGTCAKTGGTTTT-
---TATTGTTTATT
 G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T A C G T
A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:MGTCAKTGGTTTT
--TAATTGATTA-
 G T C A T A C G A G C T A G T C G T C A A C G T A C G T A C T G C A T G A G C T A C G T A G C T A C G T
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T