Information for 4-TGACCACAGB (Motif 3)

G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G
Reverse Opposite:
T G A C G A T C A C G T A T C G A G C T C A T G C T A G A G C T A G T C C G T A
p-value:1e-17
log p-value:-4.133e+01
Information Content per bp:1.640
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif12.35%
Number of Background Sequences with motif2084.5
Percentage of Background Sequences with motif4.38%
Average Position of motif in Targets51.5 +/- 27.1bp
Average Position of motif in Background50.1 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TGACCACAGB
AAACCACAGC
 G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-TGACCACAGB
NAAACCACAG-
 A C G T G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TGACCACAGB-
AAACCACAGAN
 G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-TGACCACAGB-
NWAACCACADNN
 A C G T G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TGACCACAGB
AAACCACANN
 G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TGACCACAGB
AAACCGCAA-
 G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TGACCACAGB
AAACCGCAAA
 G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TGACCACAGB
----CACAGN
 G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGACCACAGB-
GCGACCACACTG
 A C G T G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGACCACAGB-
GCGACCACCGAA
 A C G T G C A T T C A G C T G A G A T C G T A C T C G A A T G C C G T A C T A G A C T G A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A