Information for 9-CAGAATTGAG (Motif 7)

G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G
Reverse Opposite:
A G T C G C A T A T G C G T C A G C T A C G A T A G C T A T G C A C G T A C T G
p-value:1e-15
log p-value:-3.582e+01
Information Content per bp:1.830
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif183.8
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets48.3 +/- 29.3bp
Average Position of motif in Background48.4 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CAGAATTGAG--
TATCATAATTAAGGA
 A C G T A C G T A C G T G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGAATTGAG--
CGGAAGTGAAAC
 G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G A C G T A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGAATTGAG-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CAGAATTGAG-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGAATTGAG-----
-AAAATTGTTATGAA
 G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGAATTGAG-----
GGAAAAATTGTTAGGAA
 A C G T A C G T G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGAATTGAG---
-GGAAGTGAAAST
 G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G A C G T A C G T A C G T
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGAATTGAG--
ATAAACAATTAAACA
 A C G T A C G T A C G T G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

Nkx2-5/MA0063.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGAATTGAG
-TTAATTG--
 G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G
A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAGAATTGAG----
----ATTGATTYND
 G T A C C G T A A T C G T C G A C G T A C G A T A C G T A T C G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T