Information for 5-GAAAATGGGCCTA (Motif 8)

A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A
Reverse Opposite:
C G A T C G T A A C T G A C T G A G T C A G T C A G T C C G T A C G A T A C G T A G C T A G C T A G T C
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.917
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets30.1 +/- 22.5bp
Average Position of motif in Background36.1 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAAAATGGGCCTA
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAAAATGGGCCTA
GGAGAAAGGTGCGA
 A C G T A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GAAAATGGGCCTA-
------AGGCCTAG
 A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GAAAATGGGCCTA-
------AGGCCTNG
 A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAAATGGGCCTA----
CAAAAAGGGGCGTGGCAT
 A C G T A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAAAATGGGCCTA-----
-NNNTNGGGCGTATNNTN
 A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAAAATGGGCCTA
RACAAWGG-----
 A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAAAATGGGCCTA
GACAATGNN----
 A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAAAATGGGCCTA
GTTAATGGCC---
 A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GAAAATGGGCCTA
NATGGAAAAN-------
 A C G T A C G T A C G T A C G T A C T G C T G A C T G A C G T A C G T A A C G T C T A G C T A G A C T G A G T C A G T C A C G T C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T