Information for 1-GGGGAAACCC (Motif 7)

A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C
Reverse Opposite:
A C T G C T A G C T A G A C G T C A G T G C A T G A T C A G T C G A T C T G A C
p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.680
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif7.72%
Number of Background Sequences with motif1522.5
Percentage of Background Sequences with motif3.23%
Average Position of motif in Targets50.2 +/- 27.3bp
Average Position of motif in Background50.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAACCC-
GGGGGAATCCCC
 A C G T A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAAACCC--
AGGGGAATCCCCT
 A C G T A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAACCC--
AGGGGAATCCCCT
 A C G T A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GGGGAAACCC-
-GGAAATCCCC
 A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GGGGAAACCC--
--GGAAANCCCC
 A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAACCC
TGGGGA-----
 A C G T A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGGGAAACCC--
GGGAAATCCCCN
 A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGGGAAACCC--
--GGAAATTCCC
 A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAACCC
AGAGGAA----
 A C G T A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAAACCC
NNTGGAAANN-
 A C G T A C T G C T A G C T A G C T A G C G T A G T C A T G C A G A T C G A T C T G A C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T