Information for 5-CATCTCCGAA (Motif 6)

A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
Reverse Opposite:
A G C T C G A T A T G C T C A G A T C G C T G A A C T G T G C A C G A T A C T G
p-value:1e-12
log p-value:-2.818e+01
Information Content per bp:1.752
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif491.4
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets51.9 +/- 27.0bp
Average Position of motif in Background51.3 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATCTCCGAA
NVCAGCTGBBNN
 A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATCTCCGAA
CGCAGCTGCG--
 A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATCTCCGAA
NNACAGCTGC---
 A C G T A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CATCTCCGAA
NNGCAGCTGTC--
 A C G T A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATCTCCGAA
AACACCTGCT--
 A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATCTCCGAA
NNGCAGCTGTT--
 A C G T A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATCTCCGAA
NAACAGCTGT---
 A C G T A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATCTCCGAA
ACCATCTGTT--
 A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATCTCCGAA
CGCACCTGCT--
 A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CATCTCCGAA
CAGCAGCTGN---
 A C G T A C G T A C G T A G T C G C T A A C G T A G T C A G C T T A G C A G T C A T C G C G T A T C G A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T