Information for 13-CGTGGGAGCAGCT (Motif 15)

A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T
Reverse Opposite:
G T C A A C T G A G T C C G A T A C T G A G T C A C G T A T G C A G T C A G T C C G T A A G T C C T A G
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.913
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.5 +/- 26.2bp
Average Position of motif in Background43.8 +/- 1.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGTGGGAGCAGCT
---GGGAGGACNG
 A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGTGGGAGCAGCT
NGCGTGGGCGGR---
 A C G T A C G T A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGTGGGAGCAGCT
TGCGTGGGYG-----
 A C G T A C G T A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGTGGGAGCAGCT
---CGGAGC----
 A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGTGGGAGCAGCT
RGKGGGCGGAGC-
 A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CGTGGGAGCAGCT---
----NNAGCAGCTGCT
 A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTGGGAGCAGCT
CSTGGGAAAD---
 A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGTGGGAGCAGCT---
-ADGGYAGYAGCATCT
 A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CGTGGGAGCAGCT---
------AGCAGCTGCT
 A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CGTGGGAGCAGCT--
-----CAGCAGCTGN
 A G T C A C T G A C G T A C T G A C T G A T C G C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T