Information for 6-CACCCGCCTT (Motif 9)

T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T
Reverse Opposite:
C T G A C T G A A T C G A T C G A G T C T C A G T C A G C T A G C G A T A C T G
p-value:1e-9
log p-value:-2.182e+01
Information Content per bp:1.656
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.61%
Number of Background Sequences with motif1279.8
Percentage of Background Sequences with motif2.65%
Average Position of motif in Targets45.5 +/- 27.6bp
Average Position of motif in Background50.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CACCCGCCTT
TACCCGCATN
 T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CACCCGCCTT---
TCGTACCCGCATCATT
 A C G T A C G T A C G T T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CACCCGCCTT
GTACCCGCATN
 A C G T T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACCCGCCTT----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACCCGCCTT
NCTTCCCGCCC-
 A C G T A C G T T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACCCGCCTT
SNGCACCTGCHS-
 A C G T A C G T A C G T T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACCCGCCTT--
-GTCCGCCATTA
 T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T A C G T A C G T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CACCCGCCTT
NNTTCCCGCCC-
 A C G T A C G T T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACCCGCCTT--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CACCCGCCTT-----
GCCCCGCCCCCTCCC
 T G A C G C T A G A T C A G T C A G T C T C A G T A G C T A G C G A C T G A C T A C G T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C