Information for 4-AGGGGAATCT (Motif 5)

T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T
Reverse Opposite:
G T C A A T C G C T G A A C G T C G A T A G T C A G T C A G T C A G T C A G C T
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.844
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif102.2
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets49.3 +/- 25.8bp
Average Position of motif in Background49.3 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGGGGAATCT---
AGGGGAATCCCCT
 T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T A C G T A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGGGGAATCT
AGAGGAA---
 T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGGGAATCT
TGGGGA----
 T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGGGAATCT---
AGGGGAATCCCCT
 T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T A C G T A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGGGAATCT
GGAGGGGGAA--
 A C G T A C G T T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGGGAATCT--
GGGGGAATCCCC
 T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T A C G T A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGGGAATCT
CCWGGAATGY
 T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

PB0204.1_Zfp740_2/Jaspar

Match Rank:8
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------AGGGGAATCT
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGGGAATCT--
--GGGAATTTCC
 T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T A C G T A C G T
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGGGAATCT-
-NTGGAATGTN
 T C G A A C T G C T A G A C T G C T A G G C T A C G T A G A C T A T G C A C G T A C G T
A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G