Information for 3-AGATCGGCCG (Motif 4)

C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G
Reverse Opposite:
A G T C C A T G A T C G A G T C A T G C A T C G C G T A C G A T A G T C A G C T
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.838
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif88.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.1 +/- 23.1bp
Average Position of motif in Background54.1 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGATCGGCCG
CCGATTGGCT-
 A C G T C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGATCGGCCG-
-GCTCGGSCTC
 C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

TFAP4/MA0691.1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGATCGGCCG--
--ATCAGCTGTT
 C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G A C G T A C G T
A C G T A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGATCGGCCG-----
AGATGKDGAGATAAG
 C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G A C G T A C G T A C G T A C G T A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGATCGGCCG------
NAGANTGGCGGGGNGNA
 A C G T C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGATCGGCCG----
CTGATTGGTCNATTT
 A C G T C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGATCGGCCG
-YAACBGCC-
 C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G
A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGATCGGCCG--
TGATTGGCTANN
 C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AGATCGGCCG-------
--GTCWGCTGTYYCTCT
 C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AGATCGGCCG-
NTGATTGACAGN
 A C G T C T G A A C T G C G T A G C A T A T G C A T C G C T A G A T G C G T A C A C T G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G