Information for 6-AAGCAAGHGC (Motif 13)

G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C
Reverse Opposite:
A C T G A G T C C T A G A G T C A C G T C G A T A C T G A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.778
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif137.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets48.2 +/- 28.9bp
Average Position of motif in Background46.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAGCAAGHGC--
SDGCAGGTGCNS
 G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAGHGC
AAGGCAAGTGT
 A C G T G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGCAAGHGC-
-GGCACGTGCC
 G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C A C G T
A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAGCAAGHGC--
--KCACGTGMCN
 G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C A C G T A C G T
A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGCAAGHGC
-ACCACGTG-
 G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C
A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T

MNT/MA0825.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGCAAGHGC-
-ACCACGTGCC
 G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C A C G T
A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

BHLHE40/MA0464.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGCAAGHGC-
-ATCACGTGAC
 G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C A C G T
A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C

MAX/MA0058.3/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGCAAGHGC-
-ACCACGTGCT
 G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C A C G T
A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGCAAGHGC-
-GGCACGCGTC
 G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGCAAGHGC-
GCGCCTGCGCA
 G T C A G T C A A C T G A G T C G C T A T G C A T C A G G A T C A C T G A G T C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A