p-value: | 1e-9 |
log p-value: | -2.076e+01 |
Information Content per bp: | 1.897 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 1.24% |
Number of Background Sequences with motif | 5.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 44.6 +/- 26.6bp |
Average Position of motif in Background | 37.0 +/- 30.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.40 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SA0002.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCCTGCCTGCAGG-- TTTTTTTTTTTTTTCAGGTT |
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SA0001.1_at_AC_acceptor/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TCCTGCCTGCAGG-- TTTTTTTTTTTTTTCAGGTT |
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TFAP2A(var.2)/MA0810.1/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCCTGCCTGCAGG-- ---TGCCCNGGGGCA |
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TFAP2B/MA0811.1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCCTGCCTGCAGG-- ---TGCCCTNGGGCA |
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TFAP2C/MA0524.2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCCTGCCTGCAGG-- ---TGCCCTNGGGCA |
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Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TCCTGCCTGCAGG----- ------SDGCAGGTGCNS |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TCCTGCCTGCAGG --CTGTCTGG--- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCCTGCCTGCAGG----- ---DCHCAGCAGGRGGCC |
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Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCCTGCCTGCAGG -SCTGTCARCACC |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TCCTGCCTGCAGG- --CCCCCTGCTGTG |
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