Information for 9-CTGGATCACC (Motif 24)

G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C
Reverse Opposite:
T A C G A C T G G C A T T C A G G C T A A C G T T G A C A G T C G C T A A C T G
p-value:1e-7
log p-value:-1.650e+01
Information Content per bp:1.705
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif7.75%
Number of Background Sequences with motif1276.8
Percentage of Background Sequences with motif2.60%
Average Position of motif in Targets53.6 +/- 27.4bp
Average Position of motif in Background50.6 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTGGATCACC
-NGGATTAN-
 G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTGGATCACC--
TGCCTGCGYCMCCTT
 A C G T A C G T A C G T G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGGATCACC
--GGATTAGC
 G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGGATCACC
NGGGATTA--
 G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTGGATCACC
TTGCCCGGATTAGG
 A C G T A C G T A C G T A C G T G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGGATCACC
-GGGATTAA-
 G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C
A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGGATCACC
-GGGATTANN
 G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTGGATCACC
GGTCTGGCAT---
 A C G T A C G T A C G T G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGGATCACC
VRGGATTARN
 G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGGATCACC----
AGGGGGATTAGCTGCC
 A C G T A C G T G T A C C G A T C T A G A C T G G T C A C G A T A G T C C G T A T G A C A T G C A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C