Information for 11-GCYKCAGRGGCASRWG (Motif 17)

A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C A T G C A C G T A C T G A G T C A G T C G A C T A G T C C G A T A C T G G T C A C T A G A C T G A G T C
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.853
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.2 +/- 23.1bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCYKCAGRGGCASRWG
TGCCCTNAGGGCA----
 A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCYKCAGRGGCASRWG
TGCCCTNAGGGCA----
 A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCYKCAGRGGCASRWG
TGCCCNNAGGGCA----
 A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCYKCAGRGGCASRWG
GTCCCCAGGGGA-----
 A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCYKCAGRGGCASRWG---
-------SDGCAGGTGCNS
 A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GCYKCAGRGGCASRWG--
--------GGCACGTGTC
 A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCYKCAGRGGCASRWG---
-------TGGCACGTGCCG
 A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

HEY2/MA0649.1/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GCYKCAGRGGCASRWG--
--------GACACGTGCC
 A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCYKCAGRGGCASRWG-----
----NNNNAGCAGCTGCTGAN
 A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCYKCAGRGGCASRWG
NGCCTGAGGCN------
 A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G C T G A A C T G A C T G A G T C C G T A A T C G C T A G C G T A A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T