Information for 6-GGGCTGCGGGCCG (Motif 9)

T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G
Reverse Opposite:
A G T C A T C G A T C G A T G C A G T C A G T C A T C G A T G C G C T A A C T G G T A C A G T C A G T C
p-value:1e-9
log p-value:-2.244e+01
Information Content per bp:1.868
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif66.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets45.1 +/- 22.5bp
Average Position of motif in Background52.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGGCTGCGGGCCG
----TNNGGGCAG
 T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGGCTGCGGGCCG
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGGCTGCGGGCCG-
TGGCAGNCTGCCAG
 T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGGCTGCGGGCCG
AAGGKGRCGCAGGCA-
 A C G T A C G T A C G T T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTGCGGGCCG--
NNNNATGCGGGTNNNN
 A C G T T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGCTGCGGGCCG
--TATGCGGGTA-
 T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G
A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGCTGCGGGCCG
-GGGGGCGGGGCC
 T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGGCTGCGGGCCG
TGCCCNGGGGCA-
 T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGGCTGCGGGCCG-
CTTGGCANNNTGCCAA
 A C G T A C G T T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGCTGCGGGCCG--
NCGCAGCGGGGGGTC
 T C A G C T A G A C T G A G T C C G A T A T C G A T G C T A C G A C T G A T C G A T G C A T G C A C T G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C