Information for 7-CGGCTCCTCT (Motif 20)

A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T
Reverse Opposite:
C G T A A T C G G T C A C T A G A C T G C T G A C A T G G A T C T A G C A C T G
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.756
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.04%
Number of Background Sequences with motif894.2
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets49.4 +/- 25.0bp
Average Position of motif in Background51.7 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGGCTCCTCT
---TTCCTCT
 A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T
A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGGCTCCTCT-
CTAATCCTCTT
 A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T A C G T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGGCTCCTCT---
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C G T A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGCTCCTCT
CACTTCCTCT
 A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGGCTCCTCT
---ATCCAC-
 A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGCTCCTCT--
CACTTCCYCTTT
 A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T A C G T A C G T
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTCCTCT--
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGGCTCCTCT
----TCCCCA
 A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T
A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGGCTCCTCT
--GCTCCG--
 A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGGCTCCTCT-
NNAYTTCCTGHN
 A C G T A G T C A T C G C T A G G T A C A G C T A G T C A G T C C A G T A T G C C G A T A C G T
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T