Information for 5-TTGTGGCGAC (Motif 5)

A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C
Reverse Opposite:
A C T G A G C T A T G C C T A G A G T C A T G C G T C A A G T C C G T A C T G A
p-value:1e-11
log p-value:-2.710e+01
Information Content per bp:1.837
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif45.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets47.9 +/- 28.3bp
Average Position of motif in Background54.2 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGGCGAC
NNHTGTGGTTWN
 A C G T A C G T A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ZBED1/MA0749.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGTGGCGAC---
CTATCGCGACATA
 A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C A C G T A C G T A C G T
G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTGTGGCGAC
GTCTGTGGTTT-
 A C G T A C G T A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGGCGAC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTGTGGCGAC
GCTGTGGTTT-
 A C G T A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTGGCGAC
CCATTGTTNY---
 A C G T A C G T A C G T A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGGCGAC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGTGGCGAC
CTGTGGTTTN
 A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTGTGGCGAC
--GTGGAT--
 A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGTGGCGAC---
-TTTGGCGCCAAA
 A G C T A C G T C T A G A C G T A T C G A C T G G A T C A T C G T C G A T A G C A C G T A C G T A C G T
A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A