Information for 1-AGMGGATAGCAGCAGC (Motif 2)

C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C
Reverse Opposite:
C A T G A G T C A C G T A C T G A G T C A G C T A T C G A G T C A G C T G T C A C G A T A G T C G T A C A C G T A G T C G A C T
p-value:1e-15
log p-value:-3.569e+01
Information Content per bp:1.780
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 19.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGMGGATAGCAGCAGC-
--ADGGYAGYAGCATCT
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C A C G T
A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:AGMGGATAGCAGCAGC-
-------AGCAGCTGCT
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.60
Offset:7
Orientation:forward strand
Alignment:AGMGGATAGCAGCAGC---
-------AGCAGCTGCTNN
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGMGGATAGCAGCAGC
-------ANCAGCTG-
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AGMGGATAGCAGCAGC-
-------CGCAGCTGCG
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGMGGATAGCAGCAGC----
---NNNNAGCAGCTGCTGAN
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:8
Orientation:forward strand
Alignment:AGMGGATAGCAGCAGC--
--------NCAGCTGCTG
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AGMGGATAGCAGCAGC--
-------GACAGCTGCAG
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGMGGATAGCAGCAGC
---SCCTAGCAACAG-
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGMGGATAGCAGCAGC-
--AGAGRRACAGCWGAC
 C T G A A C T G G T C A A C T G T A C G C G T A C A G T C T G A A C T G A T G C C T G A C T A G A G T C C G T A A C T G G T A C A C G T
A C G T A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C