Information for 10-CKGCWGTCGG (Motif 13)

T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G
Reverse Opposite:
A G T C A G T C A C T G G C T A A T G C C G A T C T A G T A G C G T A C A C T G
p-value:1e-8
log p-value:-1.918e+01
Information Content per bp:1.742
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif5.91%
Number of Background Sequences with motif1160.2
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets49.2 +/- 24.1bp
Average Position of motif in Background49.9 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CKGCWGTCGG---
CACGGCAGTTGGTNN
 A C G T A C G T T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CKGCWGTCGG
--CCAGACAG
 T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CKGCWGTCGG--
--CCAGACRSVB
 T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CKGCWGTCGG---
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CKGCWGTCGG-------
--TCCGTCGCTTAAAAG
 T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CKGCWGTCGG------
NNTNNTGTCTGGNNTNG
 A C G T T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CKGCWGTCGG------
NAGANTGGCGGGGNGNA
 A C G T T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CKGCWGTCGG----
ACCACTCTCGGTCAC
 A C G T T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CKGCWGTCGG---
---CWGGCGGGAA
 T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CKGCWGTCGG
TGGCAGTTGG
 T G A C C A T G A T C G A G T C C G T A A T C G C G A T A G T C C T A G A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G