Information for 1-CGCCATTTTG (Motif 1)

G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G
Reverse Opposite:
T A G C T C G A T G C A T C G A T C G A G C A T T A C G A T C G T G A C C T A G
p-value:1e-15
log p-value:-3.578e+01
Information Content per bp:1.661
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif7.47%
Number of Background Sequences with motif1138.9
Percentage of Background Sequences with motif2.45%
Average Position of motif in Targets47.0 +/- 24.9bp
Average Position of motif in Background52.2 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATTTTG
GCNGCCATCTTG
 A C G T A C G T G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATTTTG
GCCGCCATCTTG
 A C G T A C G T G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CGCCATTTTG
GTCCGCCATTA--
 A C G T A C G T A C G T G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------CGCCATTTTG
AAAATGGCGCCATTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.69
Offset:-8
Orientation:reverse strand
Alignment:--------CGCCATTTTG
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------CGCCATTTTG
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCCATTTTG----
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCCATTTTG----
NNNCCATTGTGTNAN
 A C G T G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGCCATTTTG
--CCTTTGTT
 G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGCCATTTTG
--CCWTTGTY
 G A T C A C T G T A G C A T G C C G T A A G C T A G C T A C G T A G C T A T C G
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T