Information for 5-GAVAGCTTCTTCTCGC (Motif 5)

C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C
Reverse Opposite:
T A C G G T A C C T A G C T G A A C T G C G T A C T G A A T C G G T C A T C G A C A T G A T G C A C G T A C G T A C G T A G T C
p-value:1e-12
log p-value:-2.816e+01
Information Content per bp:1.694
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 26.2bp
Average Position of motif in Background39.4 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAVAGCTTCTTCTCGC
ADGGYAGYAGCATCT---
 A C G T A C G T C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GAVAGCTTCTTCTCGC-
-------NYTTCCCGCC
 C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GAVAGCTTCTTCTCGC--
-------NNTTCCCGCCC
 C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAVAGCTTCTTCTCGC-
---AGATTCTTATCTGT
 C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C A C G T
A C G T A C G T A C G T C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GAVAGCTTCTTCTCGC--
-------NCTTCCCGCCC
 C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GAVAGCTTCTTCTCGC
-------GCTTCC---
 C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GAVAGCTTCTTCTCGC
GTATTGACAGCTNNTT-----
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GAVAGCTTCTTCTCGC---
---------TTCCCGCCWG
 C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAVAGCTTCTTCTCGC----
-----AGTATTCTCGGTTGC
 C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GAVAGCTTCTTCTCGC
--CAGCTGTTTCCT--
 C T A G G T C A T G C A G T C A A T C G G A T C A G C T A C G T A T G C G A C T A C G T G T A C A G C T A G T C C A T G A T G C
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T