Information for 22-GSRGCAGCAGSSGCTG (Motif 45)

C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
Reverse Opposite:
A T G C C G T A T A C G A G T C T A G C A T G C T G A C C G A T A T C G T A G C G C A T A T C G G T A C A G C T T A G C G T A C
p-value:1e-3
log p-value:-8.247e+00
Information Content per bp:1.620
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.48%
Number of Background Sequences with motif2232.8
Percentage of Background Sequences with motif4.56%
Average Position of motif in Targets56.9 +/- 25.1bp
Average Position of motif in Background49.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GSRGCAGCAGSSGCTG
NNNNAGCAGCTGCTGAN-
 A C G T A C G T C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GSRGCAGCAGSSGCTG
--AGCAGCTGCTNN--
 C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GSRGCAGCAGSSGCTG
----SDGCAGGTGCNS
 C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GSRGCAGCAGSSGCTG
--CGCAGCTGCG----
 C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GSRGCAGCAGSSGCTG
--AGCAGCTGCT----
 C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GSRGCAGCAGSSGCTG
---NCAGCTGCTG---
 C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GSRGCAGCAGSSGCTG
--GACAGCTGCAG---
 C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GSRGCAGCAGSSGCTG
NGNGACAGCTGCN----
 A C G T C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GSRGCAGCAGSSGCTG
--ANCAGCTG------
 C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GSRGCAGCAGSSGCTG
--AACAGCTGCAG---
 C A T G A T C G T C G A A C T G A T G C C G T A A T C G A T G C G C T A A C T G T A C G A T C G T C A G A T G C G A C T A T C G
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T