Information for 2-CATAGAGCTT (Motif 4)

A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T
Reverse Opposite:
G C T A C G T A A C T G A G T C A G C T A G T C G A C T T G C A C A G T T A C G
p-value:1e-12
log p-value:-2.818e+01
Information Content per bp:1.661
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif276.9
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets50.6 +/- 32.5bp
Average Position of motif in Background48.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CATAGAGCTT
GRTGMTRGAGCC-
 A C G T A C G T A C G T A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CATAGAGCTT-
----AAGCTTG
 A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CATAGAGCTT
----CAGCC-
 A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CATAGAGCTT-
TATCATTAGAACGCT
 A C G T A C G T A C G T A C G T A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CATAGAGCTT---
TTGACCGAGAATTCC
 A C G T A C G T A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CATAGAGCTT---
TCAGNGAGCGTGAC
 A C G T A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T A C G T A C G T A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CATAGAGCTT
AAGCCATAAAA---
 A C G T A C G T A C G T A C G T A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CATAGAGCTT
NGYCATAAAWCH-
 A C G T A C G T A C G T A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CATAGAGCTT
NTATYGATCH-
 A C G T A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CATAGAGCTT--
NGNTCTAGAACCNGV
 A C G T A C G T A C G T A T G C G T C A A C G T C G T A T C A G C T G A T C A G T G A C C G A T C G A T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A