Information for 20-CGCACGGTGCCCG (Motif 39)

A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G
Reverse Opposite:
G T A C C T A G A C T G A C T G A G T C C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C T G
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.913
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 29.6bp
Average Position of motif in Background68.0 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CGCACGGTGCCCG--
------ATGCCCACC
 A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGCACGGTGCCCG
----CGGAGC---
 A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCACGGTGCCCG
GCCGCGCAGTGCGT-
 A C G T A C G T A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGCACGGTGCCCG
TTGGCATGGTGCCA-
 A C G T A C G T A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGCACGGTGCCCG-
TTGGCANNNTGCCAAG
 A C G T A C G T A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CGCACGGTGCCCG--
------CTGCCCGCA
 A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGCACGGTGCCCG-----
--GGGTGTGCCCAAAAGG
 A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGCACGGTGCCCG
-GCACGTACCC--
 A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CGCACGGTGCCCG
NNTTTGCACACGGCCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CGCACGGTGCCCG
---AGCGCGCC--
 A G T C A C T G A G T C G T C A A G T C A C T G A C T G C G A T A C T G A G T C A G T C A G T C A C T G
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T