Information for 18-TCCTCGTGCTGCA (Motif 36)

C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A
Reverse Opposite:
A C G T C T A G T A G C T G C A C T A G T A G C T C G A T A G C A T C G T C G A C T A G T A C G C G T A
p-value:1e-6
log p-value:-1.456e+01
Information Content per bp:1.649
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif468.2
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets51.9 +/- 25.6bp
Average Position of motif in Background50.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCCTCGTGCTGCA
-CCCCCTGCTGTG
 C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCCTCGTGCTGCA---
-TCNCCTGCTGNGNNN
 C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCCTCGTGCTGCA
NNAYTTCCTGHN------
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCCTCGTGCTGCA---
-TNTCCTGCTGTGNNG
 C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCCTCGTGCTGCA-
GGCCYCCTGCTGDGH
 A C G T C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCCTCGTGCTGCA-
GACCCCCCGCTGCGC
 A C G T C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCCTCGTGCTGCA
ACTTCCTGNT------
 A C G T A C G T A C G T C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCCTCGTGCTGCA
------NGCTN--
 C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCCTCGTGCTGCA
ACTTCCTGBT------
 A C G T A C G T A C G T C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A
C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCCTCGTGCTGCA---
-NNTCCTGCTGTGNNN
 C G A T A G T C G A T C A G C T A T G C A T C G A G C T A T C G A G T C A C G T A T C G G A T C T G C A A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C