Information for 10-CATGAGRATTCTA (Motif 20)

G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
Reverse Opposite:
A G C T C G T A C T A G T C G A C G T A A C G T A G C T A G T C G A C T A G T C C G T A A C G T A C T G
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.801
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.7 +/- 20.3bp
Average Position of motif in Background55.0 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CATGAGRATTCTA
--TGTGGATTNNN
 G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CATGAGRATTCTA
CSTGGGAAAD---
 G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CATGAGRATTCTA
NNTGTGGATTSS-
 G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATGAGRATTCTA
-ATGAATATTC--
 G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATGAGRATTCTA
CCATGTGCTT----
 A C G T G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATGAGRATTCTA
GGTCACGTGG------
 A C G T A C G T A C G T G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CATGAGRATTCTA
TATGCWAATBAV-
 G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATGAGRATTCTA
GTCATGTGACC----
 A C G T A C G T G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CATGAGRATTCTA
CTCATGAATATTCAT
 A C G T A C G T G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CATGAGRATTCTA
TATCATTAGAACGCT-
 A C G T A C G T A C G T G T A C C G T A A C G T A C T G C G T A C T A G C T G A C G T A C G A T A C G T A G T C C G A T C T G A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T