Information for 6-ACAATTCMAGAYA (Motif 11)

C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A G T C A C G T A C T G A C T G C G T A C G T A A G C T A C G T A C T G C G A T
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 34.8bp
Average Position of motif in Background55.8 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACAATTCMAGAYA-----
-CAAATCCAGACATCACA
 C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACAATTCMAGAYA
---ATGCCAGACN
 C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------ACAATTCMAGAYA
NNCNNAACAATTNT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ACAATTCMAGAYA
TNCNNAACAATTTTTNC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACAATTCMAGAYA
ATAAACAATTAAACA--
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACAATTCMAGAYA-
AATCAATTCAATAATT
 A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATTCMAGAYA
NNTNANAACAATTNNA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------ACAATTCMAGAYA
TCACGGAACAATAGGTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATTCMAGAYA
NNNNNGAACAATTGANN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAATTCMAGAYA
NAACAAT--------
 A C G T A C G T C G T A A G T C C G T A C T G A A C G T A C G T A G T C G T A C C G T A A C T G C G T A G A T C C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T