Information for 1-GCAAAAAGCCGCG (Motif 1)

A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T A C G A T G C
p-value:1e-21
log p-value:-5.049e+01
Information Content per bp:1.874
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.9 +/- 28.7bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-3.1
Multiplicity (# of sites on avg that occur together)2.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAAAAAGCCGCG--
AGCAACAGCCGCACC
 A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAAAGCCGCG
CAATTGCAAAAATAT---
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCCGCG----
--ATAAAGGCGCGCGAT
 A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCCGCG----
--ATAAGGGCGCGCGAT
 A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCAAAAAGCCGCG------
-CAAAAAGGGGCGTGGCAT
 A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAAAAAGCCGCG-
GGAGAAAGGTGCGA
 A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGCG
GGAACAAAGR----
 A C G T A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCAAAAAGCCGCG------
-AAAAATGGCGCCATTTTT
 A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F2/MA0864.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCAAAAAGCCGCG-----
--AAAATGGCGCCATTTT
 A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGCG
VRRACAAWGG----
 A C G T A T C G A T G C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T