Information for 9-AAAASMCWCGGSG (Motif 15)

C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G
Reverse Opposite:
A G T C A T C G A G T C A G T C A C T G G C T A A C T G A C T G A T G C A C G T A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.876
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 24.5bp
Average Position of motif in Background22.6 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0102.1_Zic2_1/Jaspar

Match Rank:1
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAAASMCWCGGSG---
-ACCCCCCCGGGGGGN
 C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G A C G T A C G T A C G T
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AAAASMCWCGGSG---
-NCCCCCCCGGGGGGN
 C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G A C G T A C G T A C G T
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AAAASMCWCGGSG
AGCAACAGCCGCACC-
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AAAASMCWCGGSG---
-ATTCCCTGAGGGGAA
 C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G A C G T A C G T A C G T
A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AAAASMCWCGGSG---
--CACCCCCGGGGGGG
 C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:AAAASMCWCGGSG--
-CAGGCCNNGGCCNN
 C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:AAAASMCWCGGSG---
----GCCTCAGGGCAT
 C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.47
Offset:1
Orientation:forward strand
Alignment:AAAASMCWCGGSG---
-ATTGCCTGAGGCGAA
 C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G A C G T A C G T A C G T
A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:AAAASMCWCGGSG
NANANAC------
 C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.47
Offset:4
Orientation:forward strand
Alignment:AAAASMCWCGGSG---
----SCCTSAGGSCAW
 C G T A C G T A C G T A C G T A A T C G G T A C A G T C C G A T A G T C A C T G A C T G A T G C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T