Information for 1-TTTGTCAGGT (Motif 3)

C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T
Reverse Opposite:
G C T A G T A C G A T C A G C T A T C G C G T A A T G C G C T A C G T A G C T A
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.754
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif131.2
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets42.9 +/- 29.1bp
Average Position of motif in Background46.6 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0104.1_Meis2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTCAGGT----
NTATTGACAGGTNNTN
 A C G T A C G T C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTCAGGT----
GGATTGACAGGTCNTT
 A C G T A C G T C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTGTCAGGT
-NTGTCAN--
 C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTCAGGT----
NTATTGACAGCTNNTT
 A C G T A C G T C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T A C G T A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTTGTCAGGT
--TGTCANYT
 C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTCAGGT----
GTATTGACAGGTNNTT
 A C G T A C G T C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTTGTCAGGT
-YTGWCADY-
 C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T
A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTCAGGT----
GTATTGACAGCTNNTT
 A C G T A C G T C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTTGTCAGGT
CTCATTGTC----
 A C G T A C G T A C G T C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTGTCAGGT
CCWTTGTY----
 A C G T A C G T C G A T A C G T C A G T T A C G C G A T A T G C C T G A C T A G A C T G C G A T
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T