Information for 2-CTGAAGAAGGGTA (Motif 2)

G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A
Reverse Opposite:
A C G T C G T A A T G C A G T C A G T C A C G T A C G T A G T C C G A T A C G T A G T C C G T A C A T G
p-value:1e-12
log p-value:-2.820e+01
Information Content per bp:1.936
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.5 +/- 14.5bp
Average Position of motif in Background35.0 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGAAGAAGGGTA---
--GGAGAAAGGTGCGA
 G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A A C G T A C G T A C G T
A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGAAGAAGGGTA-
NNAGGGACAAGGGCNC
 A C G T A C G T G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGAAGAAGGGTA
-AGAGGAAGTG--
 G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTGAAGAAGGGTA
----NGAAGC---
 G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGAAGAAGGGTA
-TGGGGAAGGGCM
 G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGAAGAAGGGTA
--RAACAATGGN-
 G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CTGAAGAAGGGTA
NNNNGGGGGAAGANGG---
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGAAGAAGGGTA
ANTTCTCAGGAANNN--
 A C G T A C G T A C G T A C G T G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTGAAGAAGGGTA----
------AAGGATATNTN
 G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTGAAGAAGGGTA
--GAACAATGGN-
 G A T C A C G T A C T G C G T A C G T A A C T G C G T A C G T A A C T G A C T G A T C G A C G T T G C A
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T