Information for 14-WGSAGCTCAGCAM (Motif 21)

C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A
Reverse Opposite:
A C G T A C G T A T C G A G T C G A C T A C T G G T C A T C A G A G T C C G A T A T G C A G T C G C A T
p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.724
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif46.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets64.3 +/- 17.5bp
Average Position of motif in Background52.7 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:WGSAGCTCAGCAM---
-----GTCAGCANNTN
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:WGSAGCTCAGCAM----
--HWWGTCAGCAWWTTT
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:WGSAGCTCAGCAM
----GCTCCG---
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:WGSAGCTCAGCAM-
----DCTCAGCAGG
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A A C G T
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:WGSAGCTCAGCAM----
--GAGCACAGCAGGACA
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:WGSAGCTCAGCAM---
----NGTCAGCANTTT
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:WGSAGCTCAGCAM
-AGRGGTCA----
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:WGSAGCTCAGCAM---
-CTGAGTCAGCAATTT
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A A C G T A C G T A C G T
A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:WGSAGCTCAGCAM
--TGAGTCAGCA-
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A
A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:WGSAGCTCAGCAM----
--CCACACAGCAGGAGA
 C G T A C T A G A T C G C G T A A C T G A G T C A C G T A G T C C T G A A C T G T A G C G T C A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A