p-value: | 1e-10 |
log p-value: | -2.365e+01 |
Information Content per bp: | 1.532 |
Number of Target Sequences with motif | 14.0 |
Percentage of Target Sequences with motif | 8.19% |
Number of Background Sequences with motif | 169.8 |
Percentage of Background Sequences with motif | 0.74% |
Average Position of motif in Targets | 37.9 +/- 18.5bp |
Average Position of motif in Background | 48.0 +/- 25.9bp |
Strand Bias (log2 ratio + to - strand density) | -1.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | HATGGTAGCGHTGCCA- ---------CTTGGCAA |
|
|
|
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | HATGGTAGCGHTGCCA NNTGTTTATTTTGGCA |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | HATGGTAGCGHTGCCA- ---GGTTGCCATGGCAA |
|
|
|
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 4 |
Score: | 0.53 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | HATGGTAGCGHTGCCA --------ARNTGACA |
|
|
|
NFIA/MA0670.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | HATGGTAGCGHTGCCA--- ---------GGTGCCAAGT |
|
|
|
SOX21/MA0866.1/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---HATGGTAGCGHTGCCA AACAATGGTAGTGTT---- |
|
|
|
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | HATGGTAGCGHTGCCA- ---------RHTGWCAR |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | HATGGTAGCGHTGCCA- ---NGTTGCCATGGCAA |
|
|
|
Hic1/MA0739.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | HATGGTAGCGHTGCCA- --------GGTTGGCAT |
|
|
|
NFIX/MA0671.1/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | HATGGTAGCGHTGCCA-- ---------CGTGCCAAG |
|
|
|