Information for 2-CAWTGMARWTMMCTGK (Motif 2)

A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
Reverse Opposite:
T G A C A G T C C G T A A C T G A C T G A C G T C G T A C G A T A G C T A C G T A C T G A G T C C G T A C G A T A C G T A C T G
p-value:1e-12
log p-value:-2.937e+01
Information Content per bp:1.832
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.8 +/- 21.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAWTGMARWTMMCTGK
TAATTCAATGAAGTG------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CAWTGMARWTMMCTGK
------RYHYACCTGB
 A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAWTGMARWTMMCTGK
TTGAATGAAATTCGA---
 A C G T A C G T A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAWTGMARWTMMCTGK
ATATGCAAATNNN---
 A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CAWTGMARWTMMCTGK
AATCGCACTGCATTCCG----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAWTGMARWTMMCTGK
-ACTACAATTCCC---
 A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAWTGMARWTMMCTGK
ATATGCAAAT------
 A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAWTGMARWTMMCTGK
TTATGCAAAT------
 A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAWTGMARWTMMCTGK
-WATGCAAATGAG---
 A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAWTGMARWTMMCTGK
-TATGCWAATBAV---
 A G T C C G T A C G T A A C G T A C T G G T A C C G T A C T G A C G T A A C G T G T C A G T A C A G T C A C G T A C T G A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T