Information for 18-TAAAAATTCAACA (Motif 28)

A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T A C G T C T A G G C T A C G T A A C G T A C G T C G A T A G C T A C G T C G T A
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.841
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets48.4 +/- 20.7bp
Average Position of motif in Background57.7 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TAAAAATTCAACA
ATGCTAAAAATAGAA--
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAAAAATTCAACA
TCTAAAAATAGA---
 A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAAAAATTCAACA
ATAAACAATTAAACA
 A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAAAAATTCAACA
-AATAATT-----
 A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAAAAATTCAACA
ACTATAAATAGA---
 A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAAAATTCAACA---
AATCAATTCAATAATT
 A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAAAAATTCAACA
GCTAAAAATAGC---
 A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAAAAATTCAACA
DCYAAAAATAGM---
 A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAAAATTCAACA
GCTATAAATAGC---
 A C G T A C G T A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAAAAATTCAACA
NAACAAT------
 A C G T C G T A C T G A C G T A C G T A C G T A A C G T C G A T A G T C G T C A G T C A A T G C C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T