Information for 12-TCCTATTATT (Motif 26)

A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C T G A C T G C G T A
p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.942
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.0 +/- 21.7bp
Average Position of motif in Background40.5 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------TCCTATTATT
GATAACATCCTAGTAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCCTATTATT
---AATTATT
 A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCCTATTATT------
--CTAATATTGCTAAA
 A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCCTATTATT------
--CTAATATTGCTAAA
 A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCCTATTATT-----
TTCTATTTTTAGNNN
 A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Arid3b/MA0601.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCTATTATT---
--ATATTAATTAA
 A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCCTATTATT--
--CTATTTTTGG
 A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCCTATTATT
-CCAATTAA-
 A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T
A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCCTATTATT
--CAATTAA-
 A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T
A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCTATTATT---
-KCTATTTTTRGH
 A C G T A G T C A G T C A C G T C G T A C G A T A C G T C G T A C G A T A C G T A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C