Information for 11-CAGAATACAG (Motif 25)

A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G
Reverse Opposite:
G T A C A C G T A C T G A C G T C T G A C G A T A C G T A G T C C G A T T C A G
p-value:1e-7
log p-value:-1.697e+01
Information Content per bp:1.843
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif23.1
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets66.1 +/- 22.6bp
Average Position of motif in Background49.5 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGAATACAG-
TCCAATCCACA
 A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Foxo1/MA0480.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGAATACAG--
-TGTAAACAGGA
 A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G A C G T A C G T
A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGAATACAG-----
CATACAATACGAAATAA
 A C G T A C G T A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGAATACAG
--GTAAACAG
 A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGAATACAG---
ATTTGCATACAATGG
 A C G T A C G T A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGAATACAG---
-SSAATCCACANN
 A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXP2/MA0593.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGAATACAG-
AAGTAAACAAA
 A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G A C G T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

PB0176.1_Sox5_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGAATACAG--
TATCATAATTAAGGA
 A C G T A C G T A C G T A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGAATACAG-
-----CACAGN
 A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAGAATACAG
ATGCATAATTCA-
 A C G T A C G T A C G T A G T C C G T A C T A G C G T A C G T A G A C T G T C A A G T C C G T A C A T G
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T