Information for 16-CTGTCTTAGTTAG (Motif 23)

A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A T G C C A G T C G T A C G T A T A C G C G T A A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.869e+01
Information Content per bp:1.922
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 21.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0175.1_Vax2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTGTCTTAGTTAG-----
--GNCTTAATTAGTGNNN
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTGTCTTAGTTAG-
----ACTAGTTAAC
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0159.1_Rhox6/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGTCTTAGTTAG-----
-TGCCTTAATTAATGCTC
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C A G G T A C T G A C G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A G C T A C T G A T G C C G A T G A T C

mix-a/MA0621.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTGTCTTAGTTAG-
---AATTAATTAGT
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0090.1_Lbx2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGTCTTAGTTAG-----
-TGCATTAATTAATGCGA
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G G T A C G T C A G A C T G A C T C G T A T C G A A G C T C G A T C T G A C T G A A G C T A C T G T A G C C T A G T C G A

LHX2/MA0700.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGTCTTAGTTAG-
----NNTAATTAGN
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGTCTTAGTTAG------
--NTTTTAGTTAACNNAGN
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTGTCTTAGTTAG
-----TTAATTAG
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

Hoxd3/MA0912.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGTCTTAGTTAG---
TTGAGTTAATTAACCT
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGTCTTAGTTAG---
TTGAGTTAATTAACCT
 A G T C A C G T A C T G A C G T A T G C A C G T A C G T G C T A A T C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T